Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : X8GVD2

dbSWEET id: dbswt_1971

Accession:   X8GVD2

Uniprot status:   Unreviewed

Organism:   Shuttleworthia

Kingdom:   Bacteria

Taxonomy back to top


Bacteria ⇒ Firmicutes ⇒ Clostridia ⇒ Clostridiales ⇒ Lachnospiraceae ⇒ Shuttleworthia.

Sequence Information back to top


Sequence length:   86

Substrate Binding Site:   GNGN           CVV:   288       CHI:   -7.8

Selectivity Filter:   SNSN           CVV:   338       CHI:   -8.6

Fasta sequence:

>tr|X8GVD2|X8GVD2_9FIRM|Unreviewed|Shuttleworthia|86
MSEKKLEIFGWVGTALSIIMYVSYIPQIIHNLNGIKGTPIQPFAAAVNGTIWVIYALLKE
KKDYPLAAANAPGVIFGLITAITAIL

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   10     Model end:   86

Inward Open:

Template:   4X5M.pdb

Model structure:  X8GVD2_inward.pdb    Alignment file: X8GVD2_inw.pir

Procheck score ⇒ Ramachandran plot: 89.7% favored    7.9% allowed    .8% week    1.6% disallowed

Outward Open:

Template:   4X5N.pdb

Model structure:  X8GVD2_outward.pdb    Alignment file: X8GVD2_out.pir

Procheck score ⇒ Ramachandran plot: 92.1% favored    7.1% allowed    .8% week    .0% disallowed

Occluded:

Template:   4QNC.pdb      4RNG.pdb

Model structure:  X8GVD2_occluded.pdb    Alignment file: X8GVD2_occ.pir

Procheck score ⇒ Ramachandran plot: 91.3% favored    6.3% allowed    2.4% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur