Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : W5UFT4

dbSWEET id: dbswt_1258

Accession:   W5UFT4

Uniprot status:   Unreviewed

Organism:   Ictalurus punctatus

Kingdom:   Metazoa

Taxonomy back to top


Eukaryota ⇒ Metazoa ⇒ Chordata ⇒ Craniata ⇒ Vertebrata ⇒ Euteleostomi ⇒ Actinopterygii ⇒ Neopterygii ⇒ Teleostei ⇒ Ostariophysi ⇒ Siluriformes ⇒ Ictaluridae ⇒ Ictalurus.

Sequence Information back to top


Sequence length:   219

Substrate Binding Site:   NNWN           CVV:   451       CHI:   -11.4

Selectivity Filter:   MNMT           CVV:   437       CHI:   -0.4

Fasta sequence:

>tr|W5UFT4|W5UFT4_ICTPU|Unreviewed|Ictalurus_punctatus|219
MDFLELLSWSCILFTIGMFSTGLTDLRKMRATQSAESVQFLPFITTCLNNLGWLYYGVLK
NDGTLMFVNSIGASLQCLYILTYFHYAKEKRNVFVQTLGMVCVLCVSWVYFSMIVPTGST
QLSQLGLACSVFTITMYLSPLADLLEIIRTRSVERLSFSLTVATFLTSTSWTLYGLQLGD
YYIMVPNTPGIATSLIRFLLFRLFDSASQGKPSSKSLQI

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   1     Model end:   206

Alignment file: W5UFT4.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  W5UFT4_inward.pdb

Procheck score ⇒ Ramachandran plot: 88.2% favored    9.1% allowed    1.6% week    1.1% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  W5UFT4_outward.pdb

Procheck score ⇒ Ramachandran plot: 89.8% favored    8.6% allowed    1.1% week    .5% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  W5UFT4_occluded.pdb

Procheck score ⇒ Ramachandran plot: 90.9% favored    8.1% allowed    1.1% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur