Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : V5Q0U0

dbSWEET id: dbswt_391

Accession:   V5Q0U0

Uniprot status:   Unreviewed

Organism:   Suaeda glauca

Kingdom:   Plantae

Taxonomy back to top


Eukaryota ⇒ Viridiplantae ⇒ Streptophyta ⇒ Embryophyta ⇒ Tracheophyta ⇒ Spermatophyta ⇒ Magnoliophyta ⇒ eudicotyledons ⇒ Gunneridae ⇒ Pentapetalae ⇒ Caryophyllales ⇒ Chenopodiaceae ⇒ Suaedoideae ⇒ Suaeda.

Sequence Information back to top


Sequence length:   323

Substrate Binding Site:   ANWN           CVV:   422       CHI:   -6.1

Selectivity Filter:   VSVT           CVV:   376       CHI:   6.9

Fasta sequence:

>tr|V5Q0U0|V5Q0U0_9CARY|Unreviewed|Suaeda_glauca|323
MFTIHNPWVFAFGILGNIISFMVFLAPLPTFIRVYKKKSTEGFQSVPYVVAIFSAMLWIY
YAMLKGNSVLLITINIAGVIIETIYVAIFITYAPRQARISTLKLLMLLNFGGFCGIILLC
HYLAKGQARLQLYGWICVAFSISVFVAPLSVIRTVIRTKSVEYMPFNLSCCLTLTATVWF
FYGFVQKDLYVTLPNVVGFIFGIAQMTLYLVYSRKYGKEAEKQKLPEVASPVKQETIEIH
TINNKTEDIIPPQEIEVVIATKNEHGDYSDEEVGSNNKELKAQQDSFNGPSSQGPATCNV
DAEKMGCGPGPAPIVPLVVQCAV

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   2     Model end:   214

Alignment file: V5Q0U0.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  V5Q0U0_inward.pdb

Procheck score ⇒ Ramachandran plot: 91.5% favored    7.4% allowed    .5% week    .5% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  V5Q0U0_outward.pdb

Procheck score ⇒ Ramachandran plot: 94.2% favored    4.2% allowed    1.1% week    .5% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  V5Q0U0_occluded.pdb

Procheck score ⇒ Ramachandran plot: 93.7% favored    4.8% allowed    1.6% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0005886 - plasma membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv. 

Interpro:   IPR018179: SWEET10-like. IPR004316: SWEET_sugar_transpr. 

Panther:  PTHR10791:SF22

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur