Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : U1PXP3

dbSWEET id: dbswt_1924

Accession:   U1PXP3

Uniprot status:   Unreviewed

Organism:   Actinomyces graevenitzii

Kingdom:   Bacteria

Taxonomy back to top


Bacteria ⇒ Actinobacteria ⇒ Actinomycetales ⇒ Actinomycetaceae ⇒ Actinomyces.

Sequence Information back to top


Sequence length:   112

Substrate Binding Site:   CNCN           CVV:   364       CHI:   -2

Selectivity Filter:   ANAN           CVV:   326       CHI:   -3.4

Fasta sequence:

>tr|U1PXP3|U1PXP3_9ACTO|Unreviewed|Actinomyces graevenitzii| 112
MSKQAESSKDEKNAQAASEQEVRSGLALTVKQEKVLGWVATFMSVCMYVAYIPQIMNNLN
GQAGNPLQPLVAAINCSLWVYYGLFKPSRDLPLAAANAPGIFFGLAAFATAL

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   37     Model end:   113

Inward Open:

Template:   4X5M.pdb

Model structure:  U1PXP3_inward.pdb    Alignment file: U1PXP3_inw.pir

Procheck score ⇒ Ramachandran plot: 91.3% favored    6.3% allowed    1.6% week    .8% disallowed

Outward Open:

Template:   4X5N.pdb

Model structure:  U1PXP3_outward.pdb    Alignment file: U1PXP3_out.pir

Procheck score ⇒ Ramachandran plot: 94.4% favored    5.6% allowed    .0% week    .0% disallowed

Occluded:

Template:   4QNC.pdb      4RNG.pdb

Model structure:  U1PXP3_occluded.pdb    Alignment file: U1PXP3_occ.pir

Procheck score ⇒ Ramachandran plot: 95.2% favored    4.0% allowed    .8% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur