Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : T2KM66

dbSWEET id: dbswt_1923

Accession:   T2KM66

Uniprot status:   Unreviewed

Organism:   Formosa agariphila

Kingdom:   Bacteria

Taxonomy back to top


Bacteria ⇒ Bacteroidetes ⇒ Flavobacteriia ⇒ Flavobacteriales ⇒ Flavobacteriaceae ⇒ Formosa.

Sequence Information back to top


Sequence length:   93

Substrate Binding Site:   VNVN           CVV:   402       CHI:   1.4

Selectivity Filter:   AGAG           CVV:   230       CHI:   2.8

Fasta sequence:

>tr|T2KM66|T2KM66_9FLAO|Unreviewed|Formosa agariphila|93
MDLDQTIGILASIFTTVAVLPQIIKAIKTGMVNDVGPWMYIILCIGVALWVVYGILKQDW
PIIICNAISLVFNGIMLYILIASRQKELPVKSN

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   5     Model end:   82

Inward Open:

Template:   4X5M.pdb

Model structure:  T2KM66_inward.pdb    Alignment file: T2KM66_inw.pir

Procheck score ⇒ Ramachandran plot: 96.2% favored    3.8% allowed    .0% week    .0% disallowed

Outward Open:

Template:   4X5N.pdb

Model structure:  T2KM66_outward.pdb    Alignment file: T2KM66_out.pir

Procheck score ⇒ Ramachandran plot: 93.9% favored    6.1% allowed    .0% week    .0% disallowed

Occluded:

Template:   4QNC.pdb      4RNG.pdb

Model structure:  T2KM66_occluded.pdb    Alignment file: T2KM66_occ.pir

Procheck score ⇒ Ramachandran plot: 97.7% favored    2.3% allowed    .0% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur