Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : S8DQ82

dbSWEET id: dbswt_285

Accession:   S8DQ82

Uniprot status:   Unreviewed

Organism:   Genlisea aurea

Kingdom:   Plantae

Taxonomy back to top


Eukaryota ⇒ Viridiplantae ⇒ Streptophyta ⇒ Embryophyta ⇒ Tracheophyta ⇒ Spermatophyta ⇒ Magnoliophyta ⇒ eudicotyledons ⇒ Gunneridae ⇒ Pentapetalae ⇒ asterids ⇒ lamiids ⇒ Lamiales ⇒ Lentibulariaceae ⇒ Genlisea.

Sequence Information back to top


Sequence length:   205

Substrate Binding Site:   ANWN           CVV:   422       CHI:   -6.1

Selectivity Filter:   LSVV           CVV:   407       CHI:   11.4

Fasta sequence:

>tr|S8DQ82|S8DQ82_9LAMI|Unreviewed|Genlisea_aurea|205
FVVGLLGNIVSIMLFFSPMPIFYRIVKQKSTEGFSCMPYTVALFSAMLWLFYGLINTTVP
LVLTINAFGCAVETVYIVIFIVYANRKERILALKMVFADALGLGSIVIVTMAAVKSKKHR
VKVVGWISMVFATLVFVAPLSVMRKVIQTRSAEFLPITLSVALLLVAIIWFVYGFLLHDV
YIMAPNILGFMFAIAQIILYVKYRK

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   1     Model end:   205

Alignment file: S8DQ82.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  S8DQ82_inward.pdb

Procheck score ⇒ Ramachandran plot: 95.7% favored    2.7% allowed    1.1% week    .5% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  S8DQ82_outward.pdb

Procheck score ⇒ Ramachandran plot: 93.0% favored    6.5% allowed    .0% week    .5% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  S8DQ82_occluded.pdb

Procheck score ⇒ Ramachandran plot: 93.5% favored    4.9% allowed    1.1% week    .5% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv. 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur