Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : S4NJ70

dbSWEET id: dbswt_1914

Accession:   S4NJ70

Uniprot status:   Unreviewed

Organism:   Lactobacillus otakiensis

Kingdom:   Bacteria

Taxonomy back to top


Bacteria ⇒ Firmicutes ⇒ Bacilli ⇒ Lactobacillales ⇒ Lactobacillaceae ⇒ Lactobacillus.

Sequence Information back to top


Sequence length:   85

Substrate Binding Site:   ADAD           CVV:   316       CHI:   -3.4

Selectivity Filter:   SNSN           CVV:   338       CHI:   -8.6

Fasta sequence:

>tr|S4NJ70|S4NJ70_9LACO|Unreviewed|Lactobacillus otakiensis|85
MFSEEKVIGDIATVANMIMYISYIGEILQNLNGQPTSFIQPFCASINAALWVAYGWVKPK
RDWILIVADVPGVIFGLIAAVTAIM

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   9     Model end:   85

Inward Open:

Template:   4X5M.pdb

Model structure:  S4NJ70_inward.pdb    Alignment file: S4NJ70_inw.pir

Procheck score ⇒ Ramachandran plot: 90.8% favored    6.9% allowed    .8% week    1.5% disallowed

Outward Open:

Template:   4X5N.pdb

Model structure:  S4NJ70_outward.pdb    Alignment file: S4NJ70_out.pir

Procheck score ⇒ Ramachandran plot: 89.2% favored    9.2% allowed    .8% week    .8% disallowed

Occluded:

Template:   4QNC.pdb      4RNG.pdb

Model structure:  S4NJ70_occluded.pdb    Alignment file: S4NJ70_occ.pir

Procheck score ⇒ Ramachandran plot: 92.3% favored    5.4% allowed    .8% week    1.5% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur