Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : R7WDU0

dbSWEET id: dbswt_374

Accession:   R7WDU0

Uniprot status:   Unreviewed

Organism:   Aegilops tauschii

Kingdom:   Plantae

Taxonomy back to top


Eukaryota ⇒ Viridiplantae ⇒ Streptophyta ⇒ Embryophyta ⇒ Tracheophyta ⇒ Spermatophyta ⇒ Magnoliophyta ⇒ Liliopsida ⇒ Poales ⇒ Poaceae ⇒ BOP clade ⇒ Pooideae ⇒ Triticodae ⇒ Triticeae ⇒ Triticinae ⇒ Aegilops.

Sequence Information back to top


Sequence length:   310

Substrate Binding Site:   ANWN           CVV:   422       CHI:   -6.1

Selectivity Filter:   TSVS           CVV:   344       CHI:   1.9

Fasta sequence:

>tr|R7WDU0|R7WDU0_AEGTA|Unreviewed|Aegilops_tauschii|310
MGGLSLQHPWAFAFGLLGVSLFSLANCRMLLRAGNVISFMTYLAPLPTFYQIYRSKSTQG
FQSVPYVVALFSAMLWIYYALLKSDECLLITINSAGCVIETIYIIIYLTYAPKQAKLFTA
KILLLLNVGVFGLILLLTLLLSEGEKRVVMLGWVCVGFSVSVFVAPLSVIRLVVRTRSVE
FMPFSLSLSLTVSAVVWFLYGLLIKDKYVALPNILGFAFGVIQMGLYALYRNAMPSPAPK
QVDDADAIKVPEHVIHIAKLGPAAAIELNTHNPMERGMPPPMEDNGLACASDMTKGGIDM
VEKATRVEQV

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   20     Model end:   232

Alignment file: R7WDU0.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  R7WDU0_inward.pdb

Procheck score ⇒ Ramachandran plot: 94.2% favored    3.7% allowed    1.0% week    1.0% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  R7WDU0_outward.pdb

Procheck score ⇒ Ramachandran plot: 93.2% favored    5.2% allowed    1.0% week    .5% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  R7WDU0_occluded.pdb

Procheck score ⇒ Ramachandran plot: 92.1% favored    4.7% allowed    2.1% week    1.0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0005886 - plasma membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv. 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur