Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : Q7VAL4

dbSWEET id: dbswt_1887

Accession:   Q7VAL4

Uniprot status:   Unreviewed

Organism:   Prochlorococcus marinus

Kingdom:   Bacteria

Taxonomy back to top


Bacteria ⇒ Cyanobacteria ⇒ Synechococcales ⇒ Prochloraceae ⇒ Prochlorococcus.

Sequence Information back to top


Sequence length:   97

Substrate Binding Site:   ININ           CVV:   440       CHI:   2

Selectivity Filter:   AGAG           CVV:   230       CHI:   2.8

Fasta sequence:

>tr|Q7VAL4|Q7VAL4_PROMA|Unreviewed|Prochlorococcus marinus|97
MEAINSMDLLGLVAGTLTTIAFVPQLLKVWNSKSAKDISYVMFIMFILGIVLWEIYGWGI
HSLPVILFNVITFFLGLAILILKFIFDSRENSIVNKD

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   8     Model end:   85

Inward Open:

Template:   4X5M.pdb

Model structure:  Q7VAL4_inward.pdb    Alignment file: Q7VAL4_inw.pir

Procheck score ⇒ Ramachandran plot: 92.5% favored    6.0% allowed    1.5% week    .0% disallowed

Outward Open:

Template:   4X5N.pdb

Model structure:  Q7VAL4_outward.pdb    Alignment file: Q7VAL4_out.pir

Procheck score ⇒ Ramachandran plot: 93.3% favored    6.0% allowed    .0% week    .7% disallowed

Occluded:

Template:   4QNC.pdb      4RNG.pdb

Model structure:  Q7VAL4_occluded.pdb    Alignment file: Q7VAL4_occ.pir

Procheck score ⇒ Ramachandran plot: 97.0% favored    3.0% allowed    .0% week    .0% disallowed

Gene Informationback to top


Gene ID:   1462828

Gene Ontologyback to top


GO:0016021 - integral component of membrane

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur