Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : Q4UMV8

dbSWEET id: dbswt_1883

Accession:   Q4UMV8

Uniprot status:   Unreviewed

Organism:   Rickettsia felis

Kingdom:   Bacteria

Taxonomy back to top


Bacteria ⇒ Proteobacteria ⇒ Alphaproteobacteria ⇒ Rickettsiales ⇒ Rickettsiaceae ⇒ Rickettsieae ⇒ Rickettsia ⇒ spotted fever group.

Sequence Information back to top


Sequence length:   137

Substrate Binding Site:   LNLN           CVV:   440       CHI:   0.6

Selectivity Filter:   MAMA           CVV:   382       CHI:   7.4

Fasta sequence:

>tr|Q4UMV8|Q4UMV8_RICFE|Unreviewed|Rickettsia felis| 137
MNVIACVDISARHELRSRRLHGNLMKYPEIASSKLTVSPRNDEKIRNKHMSPKFMKFYEK
YMTIVGTIGNFMFYVQAHKIFTCKSSASVSMPAFTISAIALCSWLIYGILIKNTPIIIAN
IVGFIGALLVLLTIIIY

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   59     Model end:   136

Inward Open:

Template:   4X5M.pdb

Model structure:  Q4UMV8_inward.pdb    Alignment file: Q4UMV8_inw.pir

Procheck score ⇒ Ramachandran plot: 91.2% favored    8.1% allowed    .7% week    .0% disallowed

Outward Open:

Template:   4X5N.pdb

Model structure:  Q4UMV8_outward.pdb    Alignment file: Q4UMV8_out.pir

Procheck score ⇒ Ramachandran plot: 93.4% favored    5.1% allowed    .0% week    1.5% disallowed

Occluded:

Template:   4QNC.pdb      4RNG.pdb

Model structure:  Q4UMV8_occluded.pdb    Alignment file: Q4UMV8_occ.pir

Procheck score ⇒ Ramachandran plot: 95.6% favored    4.4% allowed    .0% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur