Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : Q2M1B6

dbSWEET id: dbswt_1222

Accession:   Q2M1B6

Uniprot status:   Unreviewed

Organism:   Drosophila pseudoobscura

Kingdom:   Metazoa

Taxonomy back to top


Eukaryota ⇒ Metazoa ⇒ Ecdysozoa ⇒ Arthropoda ⇒ Hexapoda ⇒ Insecta ⇒ Pterygota ⇒ Neoptera ⇒ Endopterygota ⇒ Diptera ⇒ Brachycera ⇒ Muscomorpha ⇒ Ephydroidea ⇒ Drosophilidae ⇒ Drosophila ⇒ Sophophora.

Sequence Information back to top


Sequence length:   231

Substrate Binding Site:   TNWN           CVV:   448       CHI:   -8.6

Selectivity Filter:   QLLV           CVV:   467       CHI:   8.3

Fasta sequence:

>tr|Q2M1B6|Q2M1B6_DROPS|Unreviewed|Drosophila_pseudoobscura|231
MEALGDLLAPHSELIAKVAGTITTLQFLSGIALLNDIRKKGSSDVYPVGPFLGGVVLTVL
SLKLANIMNDAAMINTNLIGLVINFVFLGGFYYYASSGSRGNIWKQIGYASIFLLACTAY
ANFEDPKKIEFRLGMLITGILVWLVGSPLLHLPKIIAKKSTEGMPFPIILSGNLVATSWM
LYAISIKNTVMVLQNLLLLILGGIQLSMFAIYPNKPAAKKPAAKKDSKKEK

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   5     Model end:   214

Alignment file: Q2M1B6.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  Q2M1B6_inward.pdb

Procheck score ⇒ Ramachandran plot: 87.2% favored    8.3% allowed    2.2% week    2.2% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  Q2M1B6_outward.pdb

Procheck score ⇒ Ramachandran plot: 89.4% favored    9.4% allowed    .6% week    .6% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  Q2M1B6_occluded.pdb

Procheck score ⇒ Ramachandran plot: 88.9% favored    9.4% allowed    1.1% week    .6% disallowed

Gene Informationback to top


Gene ID:   4812831     Total Exons:   3     Coding Exons:   3

The diagram below shows the position of Exon-junctions in the protein structure ( Loops and transmembrane helices ).

If more than 1 exon translates a single secondary-structure , only the final exon is represented in figure.
Point on the red bars to view exon number

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0005886 - plasma membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR018178: SWEET_insect. IPR004316: SWEET_sugar_transpr. 

Panther:  PTHR10791:SF5

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur