Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : Q17A98

dbSWEET id: dbswt_1220

Accession:   Q17A98

Uniprot status:   Unreviewed

Organism:   Aedes aegypti

Kingdom:   Metazoa

Taxonomy back to top


Eukaryota ⇒ Metazoa ⇒ Ecdysozoa ⇒ Arthropoda ⇒ Hexapoda ⇒ Insecta ⇒ Pterygota ⇒ Neoptera ⇒ Endopterygota ⇒ Diptera ⇒ Nematocera ⇒ Culicoidea ⇒ Culicidae ⇒ Culicinae ⇒ Aedini ⇒ Aedes ⇒ Stegomyia.

Sequence Information back to top


Sequence length:   228

Substrate Binding Site:   TSWK           CVV:   464       CHI:   -6.3

Selectivity Filter:   QLYA           CVV:   446       CHI:   0.8

Fasta sequence:

>tr|Q17A98|Q17A98_AEDAE|Unreviewed|Aedes_aegypti|228
MDSLARVLLPYRDVIGNVAGILTIAQFLSGCFTCNKIRLKGSSEGFSALQFVFGCGLTIL
QLKYSQMLRSAPLIRTSSYALAICLAYSGCYLFYTPRGKRNDFWKLVMRTILLVGGALLY
AGFENPALVKDRFGLLVTILTLSYIGLPLLKLGEVIKNKSSEGLPLPVIMASTGASVLWL
LYGIILHNYFIIVQKVIALGLCAVQLSLFLIYPAPSKAAREHKKPKGE

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   5     Model end:   214

Alignment file: Q17A98.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  Q17A98_inward.pdb

Procheck score ⇒ Ramachandran plot: 88.4% favored    11.0% allowed    .0% week    .6% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  Q17A98_outward.pdb

Procheck score ⇒ Ramachandran plot: 93.4% favored    6.1% allowed    .6% week    .0% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  Q17A98_occluded.pdb

Procheck score ⇒ Ramachandran plot: 91.2% favored    7.2% allowed    1.1% week    .6% disallowed

Gene Informationback to top


Gene ID:   5566372     Total Exons:   4     Coding Exons:   4

The diagram below shows the position of Exon-junctions in the protein structure ( Loops and transmembrane helices ).

If more than 1 exon translates a single secondary-structure , only the final exon is represented in figure.
Point on the red bars to view exon number

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0005886 - plasma membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR018178: SWEET_insect. IPR004316: SWEET_sugar_transpr. 

Panther:  PTHR10791:SF5

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur