Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : M8C2Z8

dbSWEET id: dbswt_72

Accession:   M8C2Z8

Uniprot status:   Unreviewed

Organism:   Aegilops tauschii

Kingdom:   Plantae

Taxonomy back to top


Eukaryota ⇒ Viridiplantae ⇒ Streptophyta ⇒ Embryophyta ⇒ Tracheophyta ⇒ Spermatophyta ⇒ Magnoliophyta ⇒ Liliopsida ⇒ Poales ⇒ Poaceae ⇒ BOP clade ⇒ Pooideae ⇒ Triticodae ⇒ Triticeae ⇒ Triticinae ⇒ Aegilops.

Sequence Information back to top


Sequence length:   275

Substrate Binding Site:   CNWN           CVV:   441       CHI:   -5.4

Selectivity Filter:   VSVS           CVV:   356       CHI:   6.8

Fasta sequence:

>tr|M8C2Z8|M8C2Z8_AEGTA|Unreviewed|Aegilops_tauschii|275
MAGGLFDMSHPASALAGIAGNIVSFFVFLAPMATFLQIYRKKTTGGFSSVPYVVALFSCS
LLIFYALLKTDSPLLLTINSFGCCIETVYIVAYLVYAPPRARLRTLAYFFVLDVAAFGLV
LVVTMYAFAPAHRVKFLGSVCLAFSMAVFVAPLSIIVKVIKTKSVEFLPVGLSFCLVLSA
VAWFCYGLFTKDPFVMYPNVGGFFFSCVQIGLYCWYRKPSNAVLPTTTADAGNGNGGPTP
AAGAEQQTVIDVKDAARAAEVDQPEVIEIVPAPAV

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   6     Model end:   218

Alignment file: M8C2Z8.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  M8C2Z8_inward.pdb

Procheck score ⇒ Ramachandran plot: 94.1% favored    4.8% allowed    .5% week    .5% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  M8C2Z8_outward.pdb

Procheck score ⇒ Ramachandran plot: 94.1% favored    4.3% allowed    1.1% week    .5% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  M8C2Z8_occluded.pdb

Procheck score ⇒ Ramachandran plot: 92.5% favored    6.4% allowed    .5% week    .5% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0005887 - integral component of plasma membrane

GO:0008515 - sucrose transmembrane transporter activity

GO:0006825 - copper ion transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv. 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur