Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : M8C170

dbSWEET id: dbswt_321

Accession:   M8C170

Uniprot status:   Unreviewed

Organism:   Aegilops tauschii

Kingdom:   Plantae

Taxonomy back to top


Eukaryota ⇒ Viridiplantae ⇒ Streptophyta ⇒ Embryophyta ⇒ Tracheophyta ⇒ Spermatophyta ⇒ Magnoliophyta ⇒ Liliopsida ⇒ Poales ⇒ Poaceae ⇒ BOP clade ⇒ Pooideae ⇒ Triticodae ⇒ Triticeae ⇒ Triticinae ⇒ Aegilops.

Sequence Information back to top


Sequence length:   237

Substrate Binding Site:   ANWN           CVV:   422       CHI:   -6.1

Selectivity Filter:   VSVS           CVV:   356       CHI:   6.8

Fasta sequence:

>tr|M8C170|M8C170_AEGTA|Unreviewed|Aegilops_tauschii|237
MGAVGSPLVFAVGILGNILSFLVILAPVPTFYRVYKRKSTESFQSVPYAMALLSAMLWLY
YALLTKDLLLLTINTVGCVVESAYLAIYLAYAPKQARTFTAKLVCIMNVALYGAMVCVLQ
LLVKDGESRVTIAGGIGSAFALAVFVAPLAIIRQVIRTKSVEFLPFWLSFFLTISAVVWF
FYGLLMKDFFVATPNVLGLLFGLAQMSLHLVYKNPKKKGAVSEVQYSIGLLVWARLI

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   2     Model end:   214

Alignment file: M8C170.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  M8C170_inward.pdb

Procheck score ⇒ Ramachandran plot: 92.1% favored    5.8% allowed    2.1% week    .0% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  M8C170_outward.pdb

Procheck score ⇒ Ramachandran plot: 93.7% favored    5.3% allowed    .5% week    .5% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  M8C170_occluded.pdb

Procheck score ⇒ Ramachandran plot: 94.2% favored    4.7% allowed    1.1% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0005887 - integral component of plasma membrane

GO:0032588 - trans-Golgi network membrane

GO:0012506 - vesicle membrane

GO:0008515 - sucrose transmembrane transporter activity

GO:0071836 - nectar secretion

Family Classificationback to top


Pfam:   PF03083: MtN3_slv. 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur