Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : M8AMW1

dbSWEET id: dbswt_941

Accession:   M8AMW1

Uniprot status:   Unreviewed

Organism:   Triticum urartu

Kingdom:   Plantae

Taxonomy back to top


Eukaryota ⇒ Viridiplantae ⇒ Streptophyta ⇒ Embryophyta ⇒ Tracheophyta ⇒ Spermatophyta ⇒ Magnoliophyta ⇒ Liliopsida ⇒ Poales ⇒ Poaceae ⇒ BOP clade ⇒ Pooideae ⇒ Triticodae ⇒ Triticeae ⇒ Triticinae ⇒ Triticum.

Sequence Information back to top


Sequence length:   264

Substrate Binding Site:   CNWN           CVV:   441       CHI:   -5.4

Selectivity Filter:   LTQS           CVV:   404       CHI:   -1.2

Fasta sequence:

>tr|M8AMW1|M8AMW1_TRIUA|Unreviewed|Triticum_urartu|264
MVSADAARNIVGVIGNVISFGLFLSHAPMFRRICKAKDVEEYKPDPYLATLLTCMLWVFY
GLPIVHPNSILVVTVNGIGLVVQLVYLIIFFIYSTNNKRSKMLAVLGIEAAFMAAVVVGV
LHGAHTHEMRSMIVGILCVICGSVQYASNLTVMVRVIRTESVEYMPFFLSLAIFLSGCCW
TAYALIEFDLYVAIPNGLEAVLGLIQLILHFFYYKSTLKKKNIELPTVIVDSVDAVLRRS
WGVTDSGVYFLLGPCSSVVRSPGA

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   1     Model end:   215

Alignment file: M8AMW1.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  M8AMW1_inward.pdb

Procheck score ⇒ Ramachandran plot: 94.8% favored    4.2% allowed    .5% week    .5% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  M8AMW1_outward.pdb

Procheck score ⇒ Ramachandran plot: 93.7% favored    6.3% allowed    .0% week    .0% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  M8AMW1_occluded.pdb

Procheck score ⇒ Ramachandran plot: 91.6% favored    5.8% allowed    1.6% week    1.0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0005886 - plasma membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv. 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur