Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : M0X9M4

dbSWEET id: dbswt_346

Accession:   M0X9M4

Uniprot status:   Unreviewed

Organism:   Hordeum vulgare

Kingdom:   Plantae

Taxonomy back to top


Eukaryota ⇒ Viridiplantae ⇒ Streptophyta ⇒ Embryophyta ⇒ Tracheophyta ⇒ Spermatophyta ⇒ Magnoliophyta ⇒ Liliopsida ⇒ Poales ⇒ Poaceae ⇒ BOP clade ⇒ Pooideae ⇒ Triticodae ⇒ Triticeae ⇒ Hordeinae ⇒ Hordeum.

Sequence Information back to top


Sequence length:   288

Substrate Binding Site:   ANWN           CVV:   422       CHI:   -6.1

Selectivity Filter:   SSVS           CVV:   324       CHI:   1.8

Fasta sequence:

>tr|M0X9M4|M0X9M4_HORVD|Unreviewed|Hordeum_vulgare|288
MGGLSMEHPWAFTFGLLGNVISFSSLLAPIPTFYRIFKSKSTEGFQSVPYVVALFSAMLW
IFYALVKTGEGLLITINAAGCVIETVYIIMYLVYAPRKAKIFTAKIVLLLNIAGFGLIFV
LTLFAFHGETRVVSLGWICVGFSVCVFVAPLSIIGRVIKTKSVEYMPFSLSLTLTLSAIV
WFLYGLLIKDKYVALPNILGFTFGMIQMVLYMFYMNATPVVATDAKEGKEAWKVPAEDHV
VVINVGKADKSSCAEVRPVTEMAGDVPRRCATEAAAPGAGFARSVEVV

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   4     Model end:   216

Alignment file: M0X9M4.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  M0X9M4_inward.pdb

Procheck score ⇒ Ramachandran plot: 95.7% favored    2.7% allowed    1.1% week    .5% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  M0X9M4_outward.pdb

Procheck score ⇒ Ramachandran plot: 95.2% favored    3.7% allowed    1.1% week    .0% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  M0X9M4_occluded.pdb

Procheck score ⇒ Ramachandran plot: 93.0% favored    4.8% allowed    2.1% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0005886 - plasma membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv. 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur