Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : M0WKU4

dbSWEET id: dbswt_917

Accession:   M0WKU4

Uniprot status:   Unreviewed

Organism:   Hordeum vulgare

Kingdom:   Plantae

Taxonomy back to top


Eukaryota ⇒ Viridiplantae ⇒ Streptophyta ⇒ Embryophyta ⇒ Tracheophyta ⇒ Spermatophyta ⇒ Magnoliophyta ⇒ Liliopsida ⇒ Poales ⇒ Poaceae ⇒ BOP clade ⇒ Pooideae ⇒ Triticodae ⇒ Triticeae ⇒ Hordeinae ⇒ Hordeum.

Sequence Information back to top


Sequence length:   218

Substrate Binding Site:   ANWN           CVV:   422       CHI:   -6.1

Selectivity Filter:   LNMN           CVV:   440       CHI:   -1.3

Fasta sequence:

>tr|M0WKU4|M0WKU4_HORVD|Unreviewed|Hordeum_vulgare|218
MDAKNIVGIIGAIAVGFLVVAPVRFVFRHIIAAQDVGVRHCLPYAFTCMNAAALVFYGGN
RKDLSVIISNGFAFFMENVYCVIYLRYSHGWRRILAVTMFMVEIAFLGLLLCLQFVVFSH
GQHPDVRDRVFGSMGAVTAFFMYASTGDEIYRAHMTHNVDGMEMAFAYLGNAAMWTAYAC
IPDFDLFLLIANGIGLLFSFYEAALWIRYRNAPNLQAP

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   1     Model end:   211

Alignment file: M0WKU4.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  M0WKU4_inward.pdb

Procheck score ⇒ Ramachandran plot: 80.2% favored    9.1% allowed    6.4% week    4.3% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  M0WKU4_outward.pdb

Procheck score ⇒ Ramachandran plot: 89.8% favored    8.0% allowed    1.1% week    1.1% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  M0WKU4_occluded.pdb

Procheck score ⇒ Ramachandran plot: 86.1% favored    8.6% allowed    3.2% week    2.1% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv. 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur