Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : M0TNX6

dbSWEET id: dbswt_81

Accession:   M0TNX6

Uniprot status:   Unreviewed

Organism:   Musa acuminata

Kingdom:   Plantae

Taxonomy back to top


Eukaryota ⇒ Viridiplantae ⇒ Streptophyta ⇒ Embryophyta ⇒ Tracheophyta ⇒ Spermatophyta ⇒ Magnoliophyta ⇒ Liliopsida ⇒ Zingiberales ⇒ Musaceae ⇒ Musa.

Sequence Information back to top


Sequence length:   281

Substrate Binding Site:   CNWN           CVV:   441       CHI:   -5.4

Selectivity Filter:   VSVS           CVV:   356       CHI:   6.8

Fasta sequence:

>tr|M0TNX6|M0TNX6_MUSAM|Unreviewed|Musa_acuminata|281
MAGLSLQHPLPFTFGMLGNLISFMVFLAPIPTFYRVYRKKSTEGFHSLPYVVAVFSCMLW
IYYAYVKTDSILLITINSFGVFIETAYITIYLIYAPKKTRIMSMRIFVLLNVVVFAAIIL
LTQLLFTGSIRLKVLGWICVGFSVSVFAAPLSVIRLVIRTKSVEFLPFYLSFFLTLSAIA
WFGYGLFTKDIYVQLPNVLGFLFGVAQMVLYIVYKKKKNVVVEPAGIEHIVRIAELAIAP
ASELQAGVEENDHRKKASEGSTEGVEKAKMAAEEGIEIDAV

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   4     Model end:   216

Alignment file: M0TNX6.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  M0TNX6_inward.pdb

Procheck score ⇒ Ramachandran plot: 94.2% favored    4.7% allowed    .5% week    .5% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  M0TNX6_outward.pdb

Procheck score ⇒ Ramachandran plot: 93.2% favored    5.8% allowed    1.1% week    .0% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  M0TNX6_occluded.pdb

Procheck score ⇒ Ramachandran plot: 93.7% favored    4.7% allowed    1.1% week    .5% disallowed

Gene Informationback to top


Gene ID:   103993450     Total Exons:   6     Coding Exons:   6

The diagram below shows the position of Exon-junctions in the protein structure ( Loops and transmembrane helices ).

If more than 1 exon translates a single secondary-structure , only the final exon is represented in figure.
Point on the red bars to view exon number

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0005886 - plasma membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv. 

Interpro:   IPR018179: SWEET10-like. IPR004316: SWEET_sugar_transpr. 

Panther:  PTHR10791:SF22

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur