Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : L7LX94

dbSWEET id: dbswt_1209

Accession:   L7LX94

Uniprot status:   Unreviewed

Organism:   Rhipicephalus pulchellus

Kingdom:   Metazoa

Taxonomy back to top


Eukaryota ⇒ Metazoa ⇒ Ecdysozoa ⇒ Arthropoda ⇒ Chelicerata ⇒ Arachnida ⇒ Acari ⇒ Parasitiformes ⇒ Ixodida ⇒ Ixodoidea ⇒ Ixodidae ⇒ Rhipicephalinae ⇒ Rhipicephalus ⇒ Rhipicephalus.

Sequence Information back to top


Sequence length:   214

Substrate Binding Site:   TNWN           CVV:   448       CHI:   -8.6

Selectivity Filter:   NAFV           CVV:   403       CHI:   5.3

Fasta sequence:

>tr|L7LX94|L7LX94_9ACAR|Unreviewed|Rhipicephalus_pulchellus|214
MYSTETAKTIVGDLALVFTIVNYASGVQICRKVREKGGTHDLSPLPFLAGMLATFLWFEY
GVMKGDNILVWVNSIGFLLQMMFLCYFYSYTKVKGTLNWKILVLLLMLAGVYYEVTYFIT
DKDIALSILGMMGCIAAFLFFASPLSSLLHVVRTQSVETLPFPLILSAFLVSTLWTLYGF
ICEDAFIYTPNIMGALITACQLALFVIYPSAKQY

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   1     Model end:   210

Alignment file: L7LX94.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  L7LX94_inward.pdb

Procheck score ⇒ Ramachandran plot: 94.7% favored    4.8% allowed    .5% week    .0% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  L7LX94_outward.pdb

Procheck score ⇒ Ramachandran plot: 92.0% favored    7.0% allowed    1.1% week    .0% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  L7LX94_occluded.pdb

Procheck score ⇒ Ramachandran plot: 92.0% favored    7.0% allowed    .0% week    1.1% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur