Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : K7GWZ4

dbSWEET id: dbswt_1207

Accession:   K7GWZ4

Uniprot status:   Unreviewed

Organism:   Caenorhabditis japonica

Kingdom:   Metazoa

Taxonomy back to top


Eukaryota ⇒ Metazoa ⇒ Ecdysozoa ⇒ Nematoda ⇒ Chromadorea ⇒ Rhabditida ⇒ Rhabditoidea ⇒ Rhabditidae ⇒ Peloderinae ⇒ Caenorhabditis.

Sequence Information back to top


Sequence length:   238

Substrate Binding Site:   SQAN           CVV:   350       CHI:   -6

Selectivity Filter:   LGSM           CVV:   344       CHI:   4.9

Fasta sequence:

>tr|K7GWZ4|K7GWZ4_CAEJA|Unreviewed|Caenorhabditis_japonica|238
MDLDMGTIAPSRLFAMYTSNLVWSLFLTSTALHAVALITSPVQAVYKWVRRQSSDSDTPI
PYICAVIGSALWLRYSIFLRDTKLILLQTYAVTMQLLFVVALIFYRTKRRKLIRLMSAIS
AGMFLLFLYIGNMNDEDGKEFTGRIASGAQIAGSLVCPYLIYKAVSSKCIDFVPLAPVVF
TWVMELHAIVYSIGIDDFYMLLANTIFFCMDGSLLSMFFVYPTENKRDLKPSPIPTVM

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   16     Model end:   223

Alignment file: K7GWZ4.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  K7GWZ4_inward.pdb

Procheck score ⇒ Ramachandran plot: 86.8% favored    10.5% allowed    1.6% week    1.1% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  K7GWZ4_outward.pdb

Procheck score ⇒ Ramachandran plot: 93.2% favored    5.8% allowed    1.1% week    .0% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  K7GWZ4_occluded.pdb

Procheck score ⇒ Ramachandran plot: 90.5% favored    8.4% allowed    1.1% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0005886 - plasma membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv. 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur