Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : K4C8Y4

dbSWEET id: dbswt_210

Accession:   K4C8Y4

Uniprot status:   Unreviewed

Organism:   Solanum lycopersicum

Kingdom:   Plantae

Taxonomy back to top


Eukaryota ⇒ Viridiplantae ⇒ Streptophyta ⇒ Embryophyta ⇒ Tracheophyta ⇒ Spermatophyta ⇒ Magnoliophyta ⇒ eudicotyledons ⇒ Gunneridae ⇒ Pentapetalae ⇒ asterids ⇒ lamiids ⇒ Solanales ⇒ Solanaceae ⇒ Solanoideae ⇒ Solaneae ⇒ Solanum ⇒ Lycopersicon.

Sequence Information back to top


Sequence length:   282

Substrate Binding Site:   ANWN           CVV:   422       CHI:   -6.1

Selectivity Filter:   VSTS           CVV:   344       CHI:   1.9

Fasta sequence:

>tr|K4C8Y4|K4C8Y4_SOLLC|Unreviewed|Solanum_lycopersicum|282
MINMILLGEILIKLAMTVSFIVFLAPLPTFYNIYKKKSTEGYQSIPYVVALCSAMILIYY
VILLGGLVEVIIINAIGVFIETIYIIFYIFYAPKKAKVQTVKLLLLFLVVGFGGVFLIAQ
FLLKGAIRTKIVGRISTAFSICTFAAPLCILKKVIKTKNVECMPFLLSFFLTISAVLWFF
YGVIKKNYVIYAPNILGFTLGVIQMVLYVVYKKYKKEDNVIKEQKLSELLQNHVIILDDG
KKLPQLTQEQIIDIWKLGTLIYSEKLNASAADVDNNRPKLAN

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   2     Model end:   213

Alignment file: K4C8Y4.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  K4C8Y4_inward.pdb

Procheck score ⇒ Ramachandran plot: 94.2% favored    4.2% allowed    .5% week    1.1% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  K4C8Y4_outward.pdb

Procheck score ⇒ Ramachandran plot: 94.7% favored    4.2% allowed    1.1% week    .0% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  K4C8Y4_occluded.pdb

Procheck score ⇒ Ramachandran plot: 93.1% favored    6.3% allowed    .5% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0005886 - plasma membrane

GO:0051119 - sugar transmembrane transporter activity

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv. 

Interpro:   IPR018179: SWEET10-like. IPR004316: SWEET_sugar_transpr. 

Panther:  PTHR10791:SF22

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur