Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : K4ACX7

dbSWEET id: dbswt_444

Accession:   K4ACX7

Uniprot status:   Unreviewed

Organism:   Setaria italica

Kingdom:   Plantae

Taxonomy back to top


Eukaryota ⇒ Viridiplantae ⇒ Streptophyta ⇒ Embryophyta ⇒ Tracheophyta ⇒ Spermatophyta ⇒ Magnoliophyta ⇒ Liliopsida ⇒ Poales ⇒ Poaceae ⇒ PACMAD clade ⇒ Panicoideae ⇒ Panicodae ⇒ Paniceae ⇒ Cenchrinae ⇒ Setaria.

Sequence Information back to top


Sequence length:   311

Substrate Binding Site:   TNWN           CVV:   448       CHI:   -8.6

Selectivity Filter:   VSMN           CVV:   398       CHI:   1.8

Fasta sequence:

>tr|K4ACX7|K4ACX7_SETIT|Unreviewed|Setaria_italica|311
MAADPSFVVGIIGNVISILVFASPIKTFRRIVRNRSTEDFRWLPYVTTLLSTSLWTFYGL
LKPGGLLVVTVNGAGAALEAAYVTLYLIYAPRETKAKMVKLVLAVNVGFLAAVVVVTLAA
LHGGARLLTVGVLCAVLTIGMYAAPLGAMRTVVKTRSVEYMPFSLSFFLFLNGGVWSVYS
VLVKDYFIGVPNAIGFVLGTAQLVLYMAYRKAAPARKDDDDEAASEEADEEEGLAHLMGQ
VEMAQRRVRLHKGLSLPKPTGAPLSSPRNGFGSSIIKSLSATPVELHSVMHQHGHGRFEP
VKKHDDAEANE

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   1     Model end:   211

Alignment file: K4ACX7.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  K4ACX7_inward.pdb

Procheck score ⇒ Ramachandran plot: 94.5% favored    3.8% allowed    1.1% week    .5% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  K4ACX7_outward.pdb

Procheck score ⇒ Ramachandran plot: 94.0% favored    4.4% allowed    1.1% week    .5% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  K4ACX7_occluded.pdb

Procheck score ⇒ Ramachandran plot: 91.2% favored    7.1% allowed    1.6% week    .0% disallowed

Gene Informationback to top


Gene ID:   101782544     Total Exons:   6     Coding Exons:   6

The diagram below shows the position of Exon-junctions in the protein structure ( Loops and transmembrane helices ).

If more than 1 exon translates a single secondary-structure , only the final exon is represented in figure.
Point on the red bars to view exon number

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0005886 - plasma membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv. 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur