Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : I7L6T7

dbSWEET id: dbswt_1824

Accession:   I7L6T7

Uniprot status:   Unreviewed

Organism:   Lactococcus raffinolactis

Kingdom:   Bacteria

Taxonomy back to top


Bacteria ⇒ Firmicutes ⇒ Bacilli ⇒ Lactobacillales ⇒ Streptococcaceae ⇒ Lactococcus.

Sequence Information back to top


Sequence length:   86

Substrate Binding Site:   CNCN           CVV:   364       CHI:   -2

Selectivity Filter:   SNSN           CVV:   338       CHI:   -8.6

Fasta sequence:

>tr|I7L6T7|I7L6T7_9LACT|Unreviewed|Lactococcus raffinolactis|86
MNQEKMIKYLSWVATTMSVMMYVSYIPQIADNMSGIKGNPIQPLVAAINCTLWVVYGLCK
KQRDYALATANFPGIVFGLITFITAL

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   11     Model end:   87

Inward Open:

Template:   4X5M.pdb

Model structure:  I7L6T7_inward.pdb    Alignment file: I7L6T7_inw.pir

Procheck score ⇒ Ramachandran plot: 87.7% favored    10.0% allowed    2.3% week    .0% disallowed

Outward Open:

Template:   4X5N.pdb

Model structure:  I7L6T7_outward.pdb    Alignment file: I7L6T7_out.pir

Procheck score ⇒ Ramachandran plot: 86.2% favored    9.2% allowed    3.8% week    .8% disallowed

Occluded:

Template:   4QNC.pdb      4RNG.pdb

Model structure:  I7L6T7_occluded.pdb    Alignment file: I7L6T7_occ.pir

Procheck score ⇒ Ramachandran plot: 90.8% favored    8.5% allowed    .0% week    .8% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur