Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : I3YZZ2

dbSWEET id: dbswt_1823

Accession:   I3YZZ2

Uniprot status:   Unreviewed

Organism:   Aequorivita sublithincola

Kingdom:   Bacteria

Taxonomy back to top


Bacteria ⇒ Bacteroidetes ⇒ Flavobacteriia ⇒ Flavobacteriales ⇒ Flavobacteriaceae ⇒ Aequorivita.

Sequence Information back to top


Sequence length:   90

Substrate Binding Site:   LNLN           CVV:   440       CHI:   0.6

Selectivity Filter:   AGAG           CVV:   230       CHI:   2.8

Fasta sequence:

>tr|I3YZZ2|I3YZZ2_AEQSU|Unreviewed|Aequorivita sublithincola|90
MQFEQIIGILAGLFTTLAVLPQIIKALKTKSVDDVSPIMFITLCIGLGLWTVYGFLKEDL
PIIITNGISFILNSFMLILSITSRSKSKNF

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   5     Model end:   82

Inward Open:

Template:   4X5M.pdb

Model structure:  I3YZZ2_inward.pdb    Alignment file: I3YZZ2_inw.pir

Procheck score ⇒ Ramachandran plot: 93.2% favored    6.8% allowed    .0% week    .0% disallowed

Outward Open:

Template:   4X5N.pdb

Model structure:  I3YZZ2_outward.pdb    Alignment file: I3YZZ2_out.pir

Procheck score ⇒ Ramachandran plot: 96.2% favored    3.8% allowed    .0% week    .0% disallowed

Occluded:

Template:   4QNC.pdb      4RNG.pdb

Model structure:  I3YZZ2_occluded.pdb    Alignment file: I3YZZ2_occ.pir

Procheck score ⇒ Ramachandran plot: 94.7% favored    5.3% allowed    .0% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur