Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : I3BJJ1

dbSWEET id: dbswt_2007

Accession:   I3BJJ1

Uniprot status:   Unreviewed

Organism:   Haemophilus parainfluenzae

Kingdom:   Bacteria

Taxonomy back to top


Bacteria ⇒ Proteobacteria ⇒ Gammaproteobacteria ⇒ Pasteurellales ⇒ Pasteurellaceae ⇒ Haemophilus.

Sequence Information back to top


Sequence length:   86

Substrate Binding Site:   CNCN           CVV:   364       CHI:   -2

Selectivity Filter:   SNSN           CVV:   338       CHI:   -8.6

Fasta sequence:

>tr|I3BJJ1|I3BJJ1_HAEPA|Unreviewed|Haemophilus parainfluenzae|86
MTNQRFITILGYVATFTSVCMYVSYLQQIGLNLSGQKGGWLQPFATMINCSLWVAYGLLK
EKRDLPISLANAPGVILGLITFVTAL

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   11     Model end:   87

Inward Open:

Template:   4X5M.pdb

Model structure:  I3BJJ1_inward.pdb    Alignment file: I3BJJ1_inw.pir

Procheck score ⇒ Ramachandran plot: 85.9% favored    10.9% allowed    1.6% week    1.6% disallowed

Outward Open:

Template:   4X5N.pdb

Model structure:  I3BJJ1_outward.pdb    Alignment file: I3BJJ1_out.pir

Procheck score ⇒ Ramachandran plot: 87.5% favored    10.9% allowed    1.6% week    .0% disallowed

Occluded:

Template:   4QNC.pdb      4RNG.pdb

Model structure:  I3BJJ1_occluded.pdb    Alignment file: I3BJJ1_occ.pir

Procheck score ⇒ Ramachandran plot: 86.7% favored    11.7% allowed    1.6% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur