Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : I1FCS1

dbSWEET id: dbswt_1202

Accession:   I1FCS1

Uniprot status:   Unreviewed

Organism:   Amphimedon queenslandica

Kingdom:   Metazoa

Taxonomy back to top


Eukaryota ⇒ Metazoa ⇒ Porifera ⇒ Demospongiae ⇒ Heteroscleromorpha ⇒ Haplosclerida ⇒ Niphatidae ⇒ Amphimedon.

Sequence Information back to top


Sequence length:   215

Substrate Binding Site:   QNQT           CVV:   469       CHI:   -12.2

Selectivity Filter:   LLIL           CVV:   496       CHI:   15.9

Fasta sequence:

>tr|I1FCS1|I1FCS1_AMPQE|Unreviewed|Amphimedon_queenslandica|215
MNLMTLWLDPDVVGFISATFTICLSSTGMSSLWLLYGIVVNDNPMMFVNFIGSVLQSIYF
IIFYLFTNDKSVPGRNGLVAVVSVLFIYVTVLNLPQLLQVVVALGFICNAVTIAFFAAPL
ASMGIVVNDNPMMFVNFIGSVLQSIYFIIFCLFTNDKSVPGRNGLIAVVSVLFIYVTVLN
LPQLLQVVVALGFICNAVTIAFFAAPLASILLLRI

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   3     Model end:   216

Alignment file: I1FCS1.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  I1FCS1_inward.pdb

Procheck score ⇒ Ramachandran plot: 90.5% favored    8.4% allowed    1.1% week    .0% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  I1FCS1_outward.pdb

Procheck score ⇒ Ramachandran plot: 91.6% favored    7.4% allowed    .5% week    .5% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  I1FCS1_occluded.pdb

Procheck score ⇒ Ramachandran plot: 91.1% favored    6.3% allowed    2.1% week    .5% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur