Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : H3DLU7

dbSWEET id: dbswt_1195

Accession:   H3DLU7

Uniprot status:   Unreviewed

Organism:   Tetraodon nigroviridis

Kingdom:   Metazoa

Taxonomy back to top


Eukaryota ⇒ Metazoa ⇒ Chordata ⇒ Craniata ⇒ Vertebrata ⇒ Euteleostomi ⇒ Actinopterygii ⇒ Neopterygii ⇒ Teleostei ⇒ Neoteleostei ⇒ Acanthomorphata ⇒ Eupercaria ⇒ Tetraodontiformes ⇒ Tetradontoidea ⇒ Tetraodontidae ⇒ Tetraodon.

Sequence Information back to top


Sequence length:   218

Substrate Binding Site:   NNWN           CVV:   451       CHI:   -11.4

Selectivity Filter:   MNMT           CVV:   437       CHI:   -0.4

Fasta sequence:

>tr|H3DLU7|H3DLU7_TETNG|Unreviewed|Tetraodon_nigroviridis|218
SFMDLLNLLSWACIVFTVGMFSTGLTDIKKMQQSKSVENIQFLPFLTTCLNNLGWLYYGI
LKSDQTLILVNVIGAVLQILYIVMYFGYATEKNAVASQTLTAGIILFCASACFYPRGETQ
LSQLGLTCSVFTVSMYLSPLSSLVEVVRSRNVQCLSFPLTVATLLTSASWVLYGLQVSDL
YIVVPNTPGIITSLIRFYLFWKFGPSSQGSPSYKPIHI

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   1     Model end:   205

Alignment file: H3DLU7.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  H3DLU7_inward.pdb

Procheck score ⇒ Ramachandran plot: 90.3% favored    7.6% allowed    1.6% week    .5% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  H3DLU7_outward.pdb

Procheck score ⇒ Ramachandran plot: 90.8% favored    8.1% allowed    1.1% week    .0% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  H3DLU7_occluded.pdb

Procheck score ⇒ Ramachandran plot: 90.3% favored    8.6% allowed    1.1% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur