Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : H2ZBS3

dbSWEET id: dbswt_1193

Accession:   H2ZBS3

Uniprot status:   Unreviewed

Organism:   Ciona savignyi

Kingdom:   Metazoa

Taxonomy back to top


Eukaryota ⇒ Metazoa ⇒ Chordata ⇒ Tunicata ⇒ Ascidiacea ⇒ Enterogona ⇒ Phlebobranchia ⇒ Cionidae ⇒ Ciona.

Sequence Information back to top


Sequence length:   216

Substrate Binding Site:   TNWN           CVV:   448       CHI:   -8.6

Selectivity Filter:   MNMC           CVV:   430       CHI:   2.8

Fasta sequence:

>tr|H2ZBS3|H2ZBS3_CIOSA|Unreviewed|Ciona_savignyi|216
MSEFWINFFSNGCIVITIIMFATGIPQCMQMIKHKTTKNIPFLPYLMTNINTIGWIIYGK
MTVNFTVVLINAIGAALQTLYMTVFLFFAADKTTPLIQSTFCGLTAAITWYMVTQYVKLA
NLAINIIGFICCTLTICMFASPLAEINTVIASKSTSSISFPLTVTASLCSAMWTLFGVAL
HDNFIVVPNALGFIASASRFYLFYKYPSDPLLPYSV

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   1     Model end:   208

Alignment file: H2ZBS3.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  H2ZBS3_inward.pdb

Procheck score ⇒ Ramachandran plot: 93.1% favored    4.8% allowed    1.6% week    .5% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  H2ZBS3_outward.pdb

Procheck score ⇒ Ramachandran plot: 92.1% favored    6.3% allowed    1.1% week    .5% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  H2ZBS3_occluded.pdb

Procheck score ⇒ Ramachandran plot: 91.0% favored    7.9% allowed    .0% week    1.1% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur