Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : G0NYE3

dbSWEET id: dbswt_1177

Accession:   G0NYE3

Uniprot status:   Unreviewed

Organism:   Caenorhabditis brenneri

Kingdom:   Metazoa

Taxonomy back to top


Eukaryota ⇒ Metazoa ⇒ Ecdysozoa ⇒ Nematoda ⇒ Chromadorea ⇒ Rhabditida ⇒ Rhabditoidea ⇒ Rhabditidae ⇒ Peloderinae ⇒ Caenorhabditis.

Sequence Information back to top


Sequence length:   295

Substrate Binding Site:   GNWN           CVV:   403       CHI:   -8.3

Selectivity Filter:   LGNV           CVV:   373       CHI:   4.1

Fasta sequence:

>tr|G0NYE3|G0NYE3_CAEBE|Unreviewed|Caenorhabditis_brenneri|295
MLEVVLQVLSISAITTTIALFFCGIPICMQIRRQGAVGDISGVPFLMGVLGGSFWLRYGL
LKMDYTMIIVNVVGVSFMASYCIFFLFYSLPKKTFTCQLILVVSTITGMVLWIALKPNLD
YLGIICMTFNIMNFGAPLAGLGVVLKNREVSTLPLPMCVANFLVSSQWCLYGNLVADIYI
IIPNGIGMFLAIVQLSLFVVLPIREDEKSPLEKLANWFTGRDNKEKDLEVGECSEPSSPQ
KVPSDISAGGLHEKFEKLMAENAGSRRASIDFLGRPPSYKSRSSSVPDISSLKSA

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   1     Model end:   203

Alignment file: G0NYE3.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  G0NYE3_inward.pdb

Procheck score ⇒ Ramachandran plot: 89.1% favored    8.0% allowed    1.1% week    1.7% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  G0NYE3_outward.pdb

Procheck score ⇒ Ramachandran plot: 91.4% favored    6.9% allowed    1.7% week    .0% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  G0NYE3_occluded.pdb

Procheck score ⇒ Ramachandran plot: 89.1% favored    8.6% allowed    1.1% week    1.1% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0005886 - plasma membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur