Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : G0MKX2

dbSWEET id: dbswt_1173

Accession:   G0MKX2

Uniprot status:   Unreviewed

Organism:   Caenorhabditis brenneri

Kingdom:   Metazoa

Taxonomy back to top


Eukaryota ⇒ Metazoa ⇒ Ecdysozoa ⇒ Nematoda ⇒ Chromadorea ⇒ Rhabditida ⇒ Rhabditoidea ⇒ Rhabditidae ⇒ Peloderinae ⇒ Caenorhabditis.

Sequence Information back to top


Sequence length:   224

Substrate Binding Site:   CNWN           CVV:   441       CHI:   -5.4

Selectivity Filter:   FSSV           CVV:   386       CHI:   5.4

Fasta sequence:

>tr|G0MKX2|G0MKX2_CAEBE|Unreviewed|Caenorhabditis_brenneri|224
MMTIGQTILPYLSFTALSSTVAFFLCGLQICHRIKTRGSSEGTSPAPFLLSFLSCGLFIQ
YGLLKDDSIITYTNGIGCFLQGCYLLYFYKMTRNRKFLNKIIAIELCIIGIVVYWVAHSA
NSHLTKTTYVGNYCIFLNICSVAAPLFDIGKVVRNKSSESLPFPLCVACFVVCFQWMFYG
YIVDDIVILVPNVIATVISILQLSLFIIYPGSPPGVFPEKYEHI

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   2     Model end:   211

Alignment file: G0MKX2.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  G0MKX2_inward.pdb

Procheck score ⇒ Ramachandran plot: 90.4% favored    5.9% allowed    1.1% week    2.7% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  G0MKX2_outward.pdb

Procheck score ⇒ Ramachandran plot: 90.4% favored    8.0% allowed    1.6% week    .0% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  G0MKX2_occluded.pdb

Procheck score ⇒ Ramachandran plot: 89.3% favored    9.1% allowed    1.6% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0005886 - plasma membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur