Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : F9QBP6

dbSWEET id: dbswt_1789

Accession:   F9QBP6

Uniprot status:   Unreviewed

Organism:   Haemophilus pittmaniae

Kingdom:   Bacteria

Taxonomy back to top


Bacteria ⇒ Proteobacteria ⇒ Gammaproteobacteria ⇒ Pasteurellales ⇒ Pasteurellaceae ⇒ Haemophilus.

Sequence Information back to top


Sequence length:   87

Substrate Binding Site:   CNCN           CVV:   364       CHI:   -2

Selectivity Filter:   ANAN           CVV:   326       CHI:   -3.4

Fasta sequence:

>tr|F9QBP6|F9QBP6_9PAST|Unreviewed|Haemophilus pittmaniae|87
MKNSRFITILGWVATFTAVCMYVAYIQQIDMNLNGQKGGAIQPLATAINCTLWVIYGLFK
EKRDLPVALANAPGVFLGLATFITAIM

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   11     Model end:   87

Inward Open:

Template:   4X5M.pdb

Model structure:  F9QBP6_inward.pdb    Alignment file: F9QBP6_inw.pir

Procheck score ⇒ Ramachandran plot: 84.6% favored    13.8% allowed    .8% week    .8% disallowed

Outward Open:

Template:   4X5N.pdb

Model structure:  F9QBP6_outward.pdb    Alignment file: F9QBP6_out.pir

Procheck score ⇒ Ramachandran plot: 86.9% favored    12.3% allowed    .0% week    .8% disallowed

Occluded:

Template:   4QNC.pdb      4RNG.pdb

Model structure:  F9QBP6_occluded.pdb    Alignment file: F9QBP6_occ.pir

Procheck score ⇒ Ramachandran plot: 89.2% favored    9.2% allowed    .8% week    .8% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur