Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : F2DVE7

dbSWEET id: dbswt_320

Accession:   F2DVE7

Uniprot status:   Unreviewed

Organism:   Hordeum vulgare

Kingdom:   Plantae

Taxonomy back to top


Eukaryota ⇒ Viridiplantae ⇒ Streptophyta ⇒ Embryophyta ⇒ Tracheophyta ⇒ Spermatophyta ⇒ Magnoliophyta ⇒ Liliopsida ⇒ Poales ⇒ Poaceae ⇒ BOP clade ⇒ Pooideae ⇒ Triticodae ⇒ Triticeae ⇒ Hordeinae ⇒ Hordeum.

Sequence Information back to top


Sequence length:   314

Substrate Binding Site:   ANWN           CVV:   422       CHI:   -6.1

Selectivity Filter:   VSVS           CVV:   356       CHI:   6.8

Fasta sequence:

>tr|F2DVE7|F2DVE7_HORVD|Unreviewed|Hordeum_vulgare|314
MAAVGSPLIFAVGILGNILSFLVILAPVPTFYRVYKRKSTESFQSVPYAMALLSAMLWLY
YALLTKDLLLLTINTVGCVVETAYLAIYLAYAPKQAKAFTAKLVCIMNVALYGAMVCVLQ
LLVRDGESRVTIAGGIGSAFALAVFVAPLAIIRQVIRTKSVEFLPFWLSFFLTISAVVWF
FYGLLMKDFFVATPNVLGLLFGLAQMALHLVYKNPKKKGDVSEVQLPDDDEKNQLPLHHQ
QQQQAGTTGHVVAPPIIDDGEQVVNGSEDDVGGNKQQSVSVMDIVLPPPEEHPTLPPLDH
PAPLPPMRMAVEVV

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   2     Model end:   214

Alignment file: F2DVE7.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  F2DVE7_inward.pdb

Procheck score ⇒ Ramachandran plot: 94.2% favored    4.2% allowed    1.6% week    .0% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  F2DVE7_outward.pdb

Procheck score ⇒ Ramachandran plot: 91.6% favored    6.8% allowed    1.6% week    .0% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  F2DVE7_occluded.pdb

Procheck score ⇒ Ramachandran plot: 92.6% favored    6.3% allowed    1.1% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0005886 - plasma membrane

GO:0032588 - trans-Golgi network membrane

GO:0012506 - vesicle membrane

GO:0008515 - sucrose transmembrane transporter activity

GO:0071836 - nectar secretion

Family Classificationback to top


Pfam:   PF03083: MtN3_slv. 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur