Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : F1L1T2

dbSWEET id: dbswt_1167

Accession:   F1L1T2

Uniprot status:   Unreviewed

Organism:   Ascaris suum

Kingdom:   Metazoa

Taxonomy back to top


Eukaryota ⇒ Metazoa ⇒ Ecdysozoa ⇒ Nematoda ⇒ Chromadorea ⇒ Ascaridida ⇒ Ascaridoidea ⇒ Ascarididae ⇒ Ascaris.

Sequence Information back to top


Sequence length:   352

Substrate Binding Site:   ANWN           CVV:   422       CHI:   -6.1

Selectivity Filter:   LGNV           CVV:   373       CHI:   4.1

Fasta sequence:

>tr|F1L1T2|F1L1T2_ASCSU|Unreviewed|Ascaris_suum|352
MFLENITVLGVLSVTATISTITLFFCGIPICVNIYKRRSTKDISGAPFLMGVLGASYWLR
YGLLKMDFAMITVNVTAVSLMASYLIFYFFFTKPKLMISLEISAVLFMISIMAFLVQIYG
HSIIHPLGFACMTFNIINFGAPLAGLRVVLRQRSCETLPLPLCIANFAVSSQWCLYGVLI
KDIYLIIPNGIGMSLAIIQLALFVIFPMKEGKQALAKRLCGIDCTSSKKDVEAAKGASGK
NPSKKPWIAETISTKDLGENDPIKKDSKQATTDDAVSMDGSTTTEVTEFNQSSESALKNL
DSPAKRKKADTEGKNKANVAHPENESNKDHCNSSDKREDKKEHGVVPVINTV

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   2     Model end:   208

Alignment file: F1L1T2.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  F1L1T2_inward.pdb

Procheck score ⇒ Ramachandran plot: 90.7% favored    6.6% allowed    2.7% week    .0% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  F1L1T2_outward.pdb

Procheck score ⇒ Ramachandran plot: 94.5% favored    4.4% allowed    1.1% week    .0% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  F1L1T2_occluded.pdb

Procheck score ⇒ Ramachandran plot: 92.3% favored    4.9% allowed    2.2% week    .5% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur