Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : F1KXX0

dbSWEET id: dbswt_1295

Accession:   F1KXX0

Uniprot status:   Unreviewed

Organism:   Ascaris suum

Kingdom:   Metazoa

Taxonomy back to top


Eukaryota ⇒ Metazoa ⇒ Ecdysozoa ⇒ Nematoda ⇒ Chromadorea ⇒ Ascaridida ⇒ Ascaridoidea ⇒ Ascarididae ⇒ Ascaris.

Sequence Information back to top


Sequence length:   375

Substrate Binding Site:   GTWN           CVV:   400       CHI:   -5.5

Selectivity Filter:   LGDV           CVV:   368       CHI:   4.1

Fasta sequence:

>tr|F1KXX0|F1KXX0_ASCSU|Unreviewed|Ascaris_suum|375
MFEIFTDGVTLLNAISLFAFFTTVGLFFCGIGICRQVLKRRDTKEISGAPFMMGVVGGSC
WWAYGYLKKDQTVLYVTSVQVVLYSSYLVFYWVMTKKKLMITLKVAAVVAICSGLYLMVR
CFSMKVYHPLGVICLCLNVADFAAPLANVKYVIRKRSSQTLPLPLCIANFLVSNEWFIYG
LLKDDFYLILPNGVGAVFATINLVLFAVLPRKTGLRSPLLMLVDLVLCRSHHNVENIEAG
IAEVVYDELNDTGDKKTWSDRMIANVTGEFGNVLTKCAIKDQFAYSSTLNKASNTDTDTL
SASSVSSEENATNIMVEAQICTATALTADVKKLQQLCRQLSSKLEPQQKVPVLKRAASAP
NLTDRREDEHGTTVL

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   5     Model end:   211

Alignment file: F1KXX0.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  F1KXX0_inward.pdb

Procheck score ⇒ Ramachandran plot: 83.7% favored    12.5% allowed    2.2% week    1.6% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  F1KXX0_outward.pdb

Procheck score ⇒ Ramachandran plot: 89.1% favored    9.2% allowed    1.1% week    .5% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  F1KXX0_occluded.pdb

Procheck score ⇒ Ramachandran plot: 88.0% favored    9.8% allowed    1.1% week    1.1% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur