Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : E4X3M9

dbSWEET id: dbswt_1164

Accession:   E4X3M9

Uniprot status:   Unreviewed

Organism:   Oikopleura dioica

Kingdom:   Metazoa

Taxonomy back to top


Eukaryota ⇒ Metazoa ⇒ Chordata ⇒ Tunicata ⇒ Appendicularia ⇒ Oikopleuridae ⇒ Oikopleura.

Sequence Information back to top


Sequence length:   219

Substrate Binding Site:   SNWN           CVV:   428       CHI:   -8.7

Selectivity Filter:   MTCT           CVV:   396       CHI:   3

Fasta sequence:

>tr|E4X3M9|E4X3M9_OIKDI|Unreviewed|Oikopleura_dioica|219
MDSSVGFLSNVATLVTVFMFLCPFNECRTALQTKTVSPSFNILPYVTTAMTSTLWFTYGM
MTDQPPLIRVNSIGIVLEIAYSAVFFTVARTNKNAKILVGALAFTFSVLALTYIVEPPEL
AVQLLGLLCCSVNIICFASPLTAVKEVIRTKSTEALPPLVLQLAMFLTPLLWYFYAYLID
DSFVAVPNGLGALLGVVQLYLRYKYTQRKSRNDFIPLGA

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   1     Model end:   207

Alignment file: E4X3M9.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  E4X3M9_inward.pdb

Procheck score ⇒ Ramachandran plot: 91.3% favored    7.6% allowed    .0% week    1.1% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  E4X3M9_outward.pdb

Procheck score ⇒ Ramachandran plot: 90.8% favored    8.7% allowed    .5% week    .0% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  E4X3M9_occluded.pdb

Procheck score ⇒ Ramachandran plot: 90.8% favored    7.6% allowed    1.1% week    .5% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur