Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : E1WX46

dbSWEET id: dbswt_1727

Accession:   E1WX46

Uniprot status:   Unreviewed

Organism:   Halobacteriovorax marinus

Kingdom:   Bacteria

Taxonomy back to top


Bacteria ⇒ Proteobacteria ⇒ Deltaproteobacteria ⇒ Bdellovibrionales ⇒ Halobacteriovoraceae ⇒ Halobacteriovorax.

Sequence Information back to top


Sequence length:   92

Substrate Binding Site:   QSQS           CVV:   374       CHI:   -8.6

Selectivity Filter:   GCGC           CVV:   268       CHI:   4.2

Fasta sequence:

>tr|E1WX46|E1WX46_HALMS|Unreviewed|Halobacteriovorax marinus|92
MNYIDFSRYVVTFSSILLIIGLYHQVYKMFTTKSADDFSMLMILSLICCQVTWINYGIVL
DEWPILLLSSIELPAGALAFYGYLKFRTKHVL

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   8     Model end:   85

Inward Open:

Template:   4X5M.pdb

Model structure:  E1WX46_inward.pdb    Alignment file: E1WX46_inw.pir

Procheck score ⇒ Ramachandran plot: 94.9% favored    2.9% allowed    2.2% week    .0% disallowed

Outward Open:

Template:   4X5N.pdb

Model structure:  E1WX46_outward.pdb    Alignment file: E1WX46_out.pir

Procheck score ⇒ Ramachandran plot: 94.2% favored    4.3% allowed    1.4% week    .0% disallowed

Occluded:

Template:   4QNC.pdb      4RNG.pdb

Model structure:  E1WX46_occluded.pdb    Alignment file: E1WX46_occ.pir

Procheck score ⇒ Ramachandran plot: 92.0% favored    7.2% allowed    .7% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur