Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : D8MEH3

dbSWEET id: dbswt_1716

Accession:   D8MEH3

Uniprot status:   Unreviewed

Organism:   Leuconostoc gelidum

Kingdom:   Bacteria

Taxonomy back to top


Bacteria ⇒ Firmicutes ⇒ Bacilli ⇒ Lactobacillales ⇒ Leuconostocaceae ⇒ Leuconostoc.

Sequence Information back to top


Sequence length:   86

Substrate Binding Site:   CNCN           CVV:   364       CHI:   -2

Selectivity Filter:   SNSN           CVV:   338       CHI:   -8.6

Fasta sequence:

>tr|D8MEH3|D8MEH3_LEUGG|Unreviewed|Leuconostoc gelidum|86
MKHEKFIEYLSWTATAMSILMYVSYIPQIIDNLSGSKGNPVQPLVAAVNCGLWVLYGLIK
EDRDIPLATANFPGIIFGFVTFLTAI

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   11     Model end:   87

Inward Open:

Template:   4X5M.pdb

Model structure:  D8MEH3_inward.pdb    Alignment file: D8MEH3_inw.pir

Procheck score ⇒ Ramachandran plot: 87.3% favored    11.1% allowed    .8% week    .8% disallowed

Outward Open:

Template:   4X5N.pdb

Model structure:  D8MEH3_outward.pdb    Alignment file: D8MEH3_out.pir

Procheck score ⇒ Ramachandran plot: 87.3% favored    11.1% allowed    1.6% week    .0% disallowed

Occluded:

Template:   4QNC.pdb      4RNG.pdb

Model structure:  D8MEH3_occluded.pdb    Alignment file: D8MEH3_occ.pir

Procheck score ⇒ Ramachandran plot: 92.1% favored    6.3% allowed    .8% week    .8% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur