Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : D7VY59

dbSWEET id: dbswt_1714

Accession:   D7VY59

Uniprot status:   Unreviewed

Organism:   Chryseobacterium gleum

Kingdom:   Bacteria

Taxonomy back to top


Bacteria ⇒ Bacteroidetes ⇒ Flavobacteriia ⇒ Flavobacteriales ⇒ Flavobacteriaceae ⇒ Chryseobacterium.

Sequence Information back to top


Sequence length:   87

Substrate Binding Site:   LNLN           CVV:   440       CHI:   0.6

Selectivity Filter:   SGSG           CVV:   242       CHI:   -2.4

Fasta sequence:

>tr|D7VY59|D7VY59_9FLAO|Unreviewed|Chryseobacterium gleum|87
MNENVLGIVAGILTSVSMIPQLVKVIREKNVEDISLLMLLVLISGLSLWVWYGFKKDELP
IILSNSFAVLVNISLLVCYILYNKKRK

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   4     Model end:   81

Inward Open:

Template:   4X5M.pdb

Model structure:  D7VY59_inward.pdb    Alignment file: D7VY59_inw.pir

Procheck score ⇒ Ramachandran plot: 94.9% favored    4.3% allowed    .7% week    .0% disallowed

Outward Open:

Template:   4X5N.pdb

Model structure:  D7VY59_outward.pdb    Alignment file: D7VY59_out.pir

Procheck score ⇒ Ramachandran plot: 94.2% favored    5.1% allowed    .7% week    .0% disallowed

Occluded:

Template:   4QNC.pdb      4RNG.pdb

Model structure:  D7VY59_occluded.pdb    Alignment file: D7VY59_occ.pir

Procheck score ⇒ Ramachandran plot: 93.5% favored    5.1% allowed    1.4% week    .0% disallowed

Gene Informationback to top


Gene ID:   23026273

Gene Ontologyback to top


GO:0016021 - integral component of membrane

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur