Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : D0WE47

dbSWEET id: dbswt_1691

Accession:   D0WE47

Uniprot status:   Unreviewed

Organism:   Slackia exigua

Kingdom:   Bacteria

Taxonomy back to top


Bacteria ⇒ Actinobacteria ⇒ Coriobacteriia ⇒ Eggerthellales ⇒ Eggerthellaceae ⇒ Slackia.

Sequence Information back to top


Sequence length:   124

Substrate Binding Site:   CNCN           CVV:   364       CHI:   -2

Selectivity Filter:   ANAN           CVV:   326       CHI:   -3.4

Fasta sequence:

>tr|D0WE47|D0WE47_SLAES|Unreviewed|Slackia exigua| 124
MRVQLRIRIDGCAQEAEAPPQAMMHDRAESPDRGGGDETMNQKTLGIVGWIATCTAMLMY
IAYFPQIIHNLHGDKSGFPQPLVAAINCTLWVSYGFFQEKKDWPIVVANVPGVIFGALAA
LTAP

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   49     Model end:   125

Inward Open:

Template:   4X5M.pdb

Model structure:  D0WE47_inward.pdb    Alignment file: D0WE47_inw.pir

Procheck score ⇒ Ramachandran plot: 93.0% favored    6.2% allowed    .8% week    .0% disallowed

Outward Open:

Template:   4X5N.pdb

Model structure:  D0WE47_outward.pdb    Alignment file: D0WE47_out.pir

Procheck score ⇒ Ramachandran plot: 93.8% favored    6.2% allowed    .0% week    .0% disallowed

Occluded:

Template:   4QNC.pdb      4RNG.pdb

Model structure:  D0WE47_occluded.pdb    Alignment file: D0WE47_occ.pir

Procheck score ⇒ Ramachandran plot: 89.8% favored    10.2% allowed    .0% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur