Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : C6M9A4

dbSWEET id: dbswt_1660

Accession:   C6M9A4

Uniprot status:   Unreviewed

Organism:   Neisseria sicca

Kingdom:   Bacteria

Taxonomy back to top


Bacteria ⇒ Proteobacteria ⇒ Betaproteobacteria ⇒ Neisseriales ⇒ Neisseriaceae ⇒ Neisseria.

Sequence Information back to top


Sequence length:   85

Substrate Binding Site:   CNCN           CVV:   364       CHI:   -2

Selectivity Filter:   SNSN           CVV:   338       CHI:   -8.6

Fasta sequence:

>tr|C6M9A4|C6M9A4_NEISI|Unreviewed|Neisseria sicca|85
MTEKQMRVLSIVATLTAVGMYVSYIPQIQNNLAGNPGSPLQPLVAAINCTLWVAYGFLKE
KRDYPVVLANAPGIILGLITFITSF

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   10     Model end:   86

Inward Open:

Template:   4X5M.pdb

Model structure:  C6M9A4_inward.pdb    Alignment file: C6M9A4_inw.pir

Procheck score ⇒ Ramachandran plot: 89.5% favored    8.1% allowed    .8% week    1.6% disallowed

Outward Open:

Template:   4X5N.pdb

Model structure:  C6M9A4_outward.pdb    Alignment file: C6M9A4_out.pir

Procheck score ⇒ Ramachandran plot: 90.3% favored    8.1% allowed    1.6% week    .0% disallowed

Occluded:

Template:   4QNC.pdb      4RNG.pdb

Model structure:  C6M9A4_occluded.pdb    Alignment file: C6M9A4_occ.pir

Procheck score ⇒ Ramachandran plot: 91.1% favored    8.1% allowed    .8% week    .0% disallowed

Gene Informationback to top


Gene ID:   23784103

Gene Ontologyback to top


GO:0016021 - integral component of membrane

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur