Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : C6E580

dbSWEET id: dbswt_1659

Accession:   C6E580

Uniprot status:   Unreviewed

Organism:   Geobacter

Kingdom:   Bacteria

Taxonomy back to top


Bacteria ⇒ Proteobacteria ⇒ Deltaproteobacteria ⇒ Desulfuromonadales ⇒ Geobacteraceae ⇒ Geobacter.

Sequence Information back to top


Sequence length:   94

Substrate Binding Site:   MNMN           CVV:   440       CHI:   -3.2

Selectivity Filter:   AGAG           CVV:   230       CHI:   2.8

Fasta sequence:

>tr|C6E580|C6E580_GEOSM|Unreviewed|Geobacter|94
MTLVGTLGFCAGLLTSGAAVPQVYKTYKTRHARDISMWQLVMLSLGMLLWLIYGSMIGDL
PLILANTFSIGCYASLIAMKLRYDREDRSCSQKL

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   5     Model end:   82

Inward Open:

Template:   4X5M.pdb

Model structure:  C6E580_inward.pdb    Alignment file: C6E580_inw.pir

Procheck score ⇒ Ramachandran plot: 93.9% favored    5.3% allowed    .8% week    .0% disallowed

Outward Open:

Template:   4X5N.pdb

Model structure:  C6E580_outward.pdb    Alignment file: C6E580_out.pir

Procheck score ⇒ Ramachandran plot: 93.2% favored    6.8% allowed    .0% week    .0% disallowed

Occluded:

Template:   4QNC.pdb      4RNG.pdb

Model structure:  C6E580_occluded.pdb    Alignment file: C6E580_occ.pir

Procheck score ⇒ Ramachandran plot: 98.5% favored    1.5% allowed    .0% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur