Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : C5TQ11

dbSWEET id: dbswt_1658

Accession:   C5TQ11

Uniprot status:   Unreviewed

Organism:   Neisseria flavescens

Kingdom:   Bacteria

Taxonomy back to top


Bacteria ⇒ Proteobacteria ⇒ Betaproteobacteria ⇒ Neisseriales ⇒ Neisseriaceae ⇒ Neisseria.

Sequence Information back to top


Sequence length:   85

Substrate Binding Site:   CNCN           CVV:   364       CHI:   -2

Selectivity Filter:   SNSN           CVV:   338       CHI:   -8.6

Fasta sequence:

>tr|C5TQ11|C5TQ11_NEIFL|Unreviewed|Neisseria flavescens|85
MTEKQMRVLSVVATLTAVGMYVSYIPQIQNNLAGNPGSPLQPLVAAINCTLWVAYGFLKE
KRDYPVMLANAPGIILGLITFITSF

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   10     Model end:   86

Inward Open:

Template:   4X5M.pdb

Model structure:  C5TQ11_inward.pdb    Alignment file: C5TQ11_inw.pir

Procheck score ⇒ Ramachandran plot: 87.9% favored    11.3% allowed    .8% week    .0% disallowed

Outward Open:

Template:   4X5N.pdb

Model structure:  C5TQ11_outward.pdb    Alignment file: C5TQ11_out.pir

Procheck score ⇒ Ramachandran plot: 92.7% favored    5.6% allowed    .8% week    .8% disallowed

Occluded:

Template:   4QNC.pdb      4RNG.pdb

Model structure:  C5TQ11_occluded.pdb    Alignment file: C5TQ11_occ.pir

Procheck score ⇒ Ramachandran plot: 94.4% favored    5.6% allowed    .0% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur