Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : C2L0A1

dbSWEET id: dbswt_1648

Accession:   C2L0A1

Uniprot status:   Unreviewed

Organism:   Oribacterium sinus

Kingdom:   Bacteria

Taxonomy back to top


Bacteria ⇒ Firmicutes ⇒ Clostridia ⇒ Clostridiales ⇒ Lachnospiraceae ⇒ Oribacterium.

Sequence Information back to top


Sequence length:   87

Substrate Binding Site:   CNCN           CVV:   364       CHI:   -2

Selectivity Filter:   ASAS           CVV:   280       CHI:   2

Fasta sequence:

>tr|C2L0A1|C2L0A1_9FIRM|Unreviewed|Oribacterium sinus|87
MSKQKINLFVGSIGAFIGIFVFIAYIPQIFANLQGDKAQPFQPLFAAVSCLIWVIYGWTK
EPKKDWILIIPNSAGVILGGLTFLTAL

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   11     Model end:   88

Inward Open:

Template:   4X5M.pdb

Model structure:  C2L0A1_inward.pdb    Alignment file: C2L0A1_inw.pir

Procheck score ⇒ Ramachandran plot: 91.3% favored    7.9% allowed    .8% week    .0% disallowed

Outward Open:

Template:   4X5N.pdb

Model structure:  C2L0A1_outward.pdb    Alignment file: C2L0A1_out.pir

Procheck score ⇒ Ramachandran plot: 88.9% favored    8.7% allowed    1.6% week    .8% disallowed

Occluded:

Template:   4QNC.pdb      4RNG.pdb

Model structure:  C2L0A1_occluded.pdb    Alignment file: C2L0A1_occ.pir

Procheck score ⇒ Ramachandran plot: 88.9% favored    9.5% allowed    1.6% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur