Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : C0WLR0

dbSWEET id: dbswt_1995

Accession:   C0WLR0

Uniprot status:   Unreviewed

Organism:   Lactobacillus buchneri

Kingdom:   Bacteria

Taxonomy back to top


Bacteria ⇒ Firmicutes ⇒ Bacilli ⇒ Lactobacillales ⇒ Lactobacillaceae ⇒ Lactobacillus.

Sequence Information back to top


Sequence length:   108

Substrate Binding Site:   ASAS           CVV:   280       CHI:   2

Selectivity Filter:   SNSN           CVV:   338       CHI:   -8.6

Fasta sequence:

>tr|C0WLR0|C0WLR0_LACBU|Unreviewed|Lactobacillus buchneri| 108
MQSQLRPTQGQFRNQVQDALHKKRINEIKLIGDFATIANFIMYVSYIGEIISNLNGNPIS
PIQPLFAALNATLWVSYGWLKPKKDWRLIIASFPGVVFGVLAALTAMM

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   32     Model end:   108

Inward Open:

Template:   4X5M.pdb

Model structure:  C0WLR0_inward.pdb    Alignment file: C0WLR0_inw.pir

Procheck score ⇒ Ramachandran plot: 91.4% favored    7.8% allowed    .8% week    .0% disallowed

Outward Open:

Template:   4X5N.pdb

Model structure:  C0WLR0_outward.pdb    Alignment file: C0WLR0_out.pir

Procheck score ⇒ Ramachandran plot: 85.9% favored    10.9% allowed    .8% week    2.3% disallowed

Occluded:

Template:   4QNC.pdb      4RNG.pdb

Model structure:  C0WLR0_occluded.pdb    Alignment file: C0WLR0_occ.pir

Procheck score ⇒ Ramachandran plot: 88.3% favored    7.8% allowed    3.1% week    .8% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur