Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : B9GTN5

dbSWEET id: dbswt_730

Accession:   B9GTN5

Uniprot status:   Unreviewed

Organism:   Populus trichocarpa

Kingdom:   Plantae

Taxonomy back to top


Eukaryota ⇒ Viridiplantae ⇒ Streptophyta ⇒ Embryophyta ⇒ Tracheophyta ⇒ Spermatophyta ⇒ Magnoliophyta ⇒ eudicotyledons ⇒ Gunneridae ⇒ Pentapetalae ⇒ rosids ⇒ fabids ⇒ Malpighiales ⇒ Salicaceae ⇒ Saliceae ⇒ Populus.

Sequence Information back to top


Sequence length:   250

Substrate Binding Site:   CNWN           CVV:   441       CHI:   -5.4

Selectivity Filter:   LNMC           CVV:   430       CHI:   4.7

Fasta sequence:

>tr|B9GTN5|B9GTN5_POPTR|Unreviewed|Populus_trichocarpa|250
MEIAHFLFGIFGNATALFLFLAPTITFRRIIRSKSTELFSGIPYVMTMLNCLLSAWYGMP
FVSKNNILVSTINGTGAVIEAVYVLTFIIYAPKKEKAKFIGLLTLVLTTFAGVALVSLVV
LHGKPREIFCGFAAAIFSIIMYGSPLSIMRTVVKTKSVEFMPFFLSLFVFLCGTSWFVFG
LLGGDLFVAVPNGVGCGLGALQLILYFIYRNNKGEDKKPALPVKSMQMGIAKLHQQKELV
ANGSHVADKV

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   1     Model end:   211

Alignment file: B9GTN5.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  B9GTN5_inward.pdb

Procheck score ⇒ Ramachandran plot: 96.1% favored    2.2% allowed    .6% week    1.1% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  B9GTN5_outward.pdb

Procheck score ⇒ Ramachandran plot: 96.1% favored    3.3% allowed    .6% week    .0% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  B9GTN5_occluded.pdb

Procheck score ⇒ Ramachandran plot: 92.8% favored    6.6% allowed    .6% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0005886 - plasma membrane

GO:0051119 - sugar transmembrane transporter activity

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv. 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur