Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : B7FHR6

dbSWEET id: dbswt_564

Accession:   B7FHR6

Uniprot status:   Unreviewed

Organism:   Medicago truncatula

Kingdom:   Plantae

Taxonomy back to top


Eukaryota ⇒ Viridiplantae ⇒ Streptophyta ⇒ Embryophyta ⇒ Tracheophyta ⇒ Spermatophyta ⇒ Magnoliophyta ⇒ eudicotyledons ⇒ Gunneridae ⇒ Pentapetalae ⇒ rosids ⇒ fabids ⇒ Fabales ⇒ Fabaceae ⇒ Papilionoideae ⇒ Trifolieae ⇒ Medicago.

Sequence Information back to top


Sequence length:   250

Substrate Binding Site:   CNWS           CVV:   418       CHI:   -2.7

Selectivity Filter:   LNLA           CVV:   411       CHI:   5.9

Fasta sequence:

>tr|B7FHR6|B7FHR6_MEDTR|Unreviewed|Medicago_truncatula|250
MSETLRLAVAVLGNAASVSLYAAPMVTFKRVIRKKSTEEFSCIPYIIGLLNCLLFTWYGL
PIVSYKWENFPLVTVNGVGIALELSYVLIYFWYSSPKGKVKVAMIMTPVLLVFCIVAAVS
AFSFHDTAHRKLLVGSIGLGVSVALYGSPLVAVKKVIETKSVEFMPLPLSLCAFSASACW
LVYGILVRDVFVAGPSVVGTPLSILQLVVYFKYRKARVVEEQKIGDLEKGSIELEKVVKV
EKIVTNCEQC

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   1     Model end:   215

Alignment file: B7FHR6.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  B7FHR6_inward.pdb

Procheck score ⇒ Ramachandran plot: 92.6% favored    4.8% allowed    1.6% week    1.1% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  B7FHR6_outward.pdb

Procheck score ⇒ Ramachandran plot: 90.4% favored    6.4% allowed    2.7% week    .5% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  B7FHR6_occluded.pdb

Procheck score ⇒ Ramachandran plot: 89.9% favored    9.6% allowed    .5% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0005886 - plasma membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv. 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur