Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : B4K1W1

dbSWEET id: dbswt_1131

Accession:   B4K1W1

Uniprot status:   Unreviewed

Organism:   Drosophila grimshawi

Kingdom:   Metazoa

Taxonomy back to top


Eukaryota ⇒ Metazoa ⇒ Ecdysozoa ⇒ Arthropoda ⇒ Hexapoda ⇒ Insecta ⇒ Pterygota ⇒ Neoptera ⇒ Endopterygota ⇒ Diptera ⇒ Brachycera ⇒ Muscomorpha ⇒ Ephydroidea ⇒ Drosophilidae ⇒ Drosophila ⇒ Hawaiian Drosophila.

Sequence Information back to top


Sequence length:   232

Substrate Binding Site:   TNWN           CVV:   448       CHI:   -8.6

Selectivity Filter:   QLLV           CVV:   467       CHI:   8.3

Fasta sequence:

>tr|B4K1W1|B4K1W1_DROGR|Unreviewed|Drosophila_grimshawi|232
MDGISDLLEPYSETIGKIAGTITTLQFLSGIALLNDIRKKQSSDVYPVEPFLGGIVLTVL
SVKLGQVMGDQPMMKVNIIGFAINTVFMVGFYYYASGERKTQIWAKIGYVSLFLMSCIAY
ANFEDPKQVEFRLGMIITGILVWLVGSPLLNIPNVIKNKSTEGMPFPIIFAGQLVVTAWM
FYAFSIRNHVMVWQNLLIFVLGGIQLSMFALYPNTPVKKQPPSGKKSSKKNN

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   5     Model end:   214

Alignment file: B4K1W1.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  B4K1W1_inward.pdb

Procheck score ⇒ Ramachandran plot: 89.4% favored    8.3% allowed    .6% week    1.7% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  B4K1W1_outward.pdb

Procheck score ⇒ Ramachandran plot: 94.4% favored    5.6% allowed    .0% week    .0% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  B4K1W1_occluded.pdb

Procheck score ⇒ Ramachandran plot: 91.7% favored    6.1% allowed    2.2% week    .0% disallowed

Gene Informationback to top


Gene ID:   6571057     Total Exons:   3     Coding Exons:   3

The diagram below shows the position of Exon-junctions in the protein structure ( Loops and transmembrane helices ).

If more than 1 exon translates a single secondary-structure , only the final exon is represented in figure.
Point on the red bars to view exon number

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0005886 - plasma membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR018178: SWEET_insect. IPR004316: SWEET_sugar_transpr. 

Panther:  PTHR10791:SF5

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur