Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : B0WXK1

dbSWEET id: dbswt_1117

Accession:   B0WXK1

Uniprot status:   Unreviewed

Organism:   Culex quinquefasciatus

Kingdom:   Metazoa

Taxonomy back to top


Eukaryota ⇒ Metazoa ⇒ Ecdysozoa ⇒ Arthropoda ⇒ Hexapoda ⇒ Insecta ⇒ Pterygota ⇒ Neoptera ⇒ Endopterygota ⇒ Diptera ⇒ Nematocera ⇒ Culicoidea ⇒ Culicidae ⇒ Culicinae ⇒ Culicini ⇒ Culex ⇒ Culex.

Sequence Information back to top


Sequence length:   230

Substrate Binding Site:   CNWN           CVV:   441       CHI:   -5.4

Selectivity Filter:   QFLV           CVV:   478       CHI:   7.3

Fasta sequence:

>tr|B0WXK1|B0WXK1_CULQU|Unreviewed|Culex_quinquefasciatus|230
MEALAVTLEPYKDRIGMSAAIITVVQFFSGVFVINDIRKRGSTEGFSAGPFLGGSVFCLL
NIQFGQMLRDDAMIQVNFIGLALNIVYVCAFYLFTVGAAKTKVWGQIGVAGAVVAGILSY
VQYEDPQLVEFRFGVILTVILLLLVGMPLLGLGEILKKKCTEGLPFPIIFAGTLVSLSWL
LYGIVLRNDFIVVQNLIALALCSVQLALFAIFPSKPASKVTQKPTTKKTN

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   5     Model end:   214

Alignment file: B0WXK1.pir

Inward Open:

Template:   5CTG.pdb

Model structure:  B0WXK1_inward.pdb

Procheck score ⇒ Ramachandran plot: 89.4% favored    8.3% allowed    2.2% week    .0% disallowed

Outward Open:

Template:   5CTG_outward.pdb

Model structure:  B0WXK1_outward.pdb

Procheck score ⇒ Ramachandran plot: 93.3% favored    5.0% allowed    1.7% week    .0% disallowed

Occluded:

Template:   5CTG_occluded.pdb

Model structure:  B0WXK1_occluded.pdb

Procheck score ⇒ Ramachandran plot: 87.8% favored    10.6% allowed    .6% week    1.1% disallowed

Gene Informationback to top


Gene ID:   6044635     Total Exons:   3     Coding Exons:   3

The diagram below shows the position of Exon-junctions in the protein structure ( Loops and transmembrane helices ).

If more than 1 exon translates a single secondary-structure , only the final exon is represented in figure.
Point on the red bars to view exon number

Gene Ontologyback to top


GO:0016021 - integral component of membrane

GO:0005886 - plasma membrane

GO:0008643 - carbohydrate transport

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR018178: SWEET_insect. IPR004316: SWEET_sugar_transpr. 

Panther:  PTHR10791:SF5

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur