Details

Basic Information
Taxanomy
Sequence Information
Modeled Structures
Gene Information
Gene Ontology
Family Classification

Details : A9BBY7

dbSWEET id: dbswt_1639

Accession:   A9BBY7

Uniprot status:   Unreviewed

Organism:   Prochlorococcus marinus

Kingdom:   Bacteria

Taxonomy back to top


Bacteria ⇒ Cyanobacteria ⇒ Synechococcales ⇒ Prochloraceae ⇒ Prochlorococcus.

Sequence Information back to top


Sequence length:   115

Substrate Binding Site:   ININ           CVV:   440       CHI:   2

Selectivity Filter:   AGAG           CVV:   230       CHI:   2.8

Fasta sequence:

>tr|A9BBY7|A9BBY7_PROM4|Unreviewed|Prochlorococcus marinus| 115
MGSTHKIYLSSMSSLSPIDILGLVAGSLTTAAFVPQLLKVWISKSANDISYLMFILFIIG
IVLWEIYGWEIHSMPVILFNIITFILGLAILILKFVFDSRNNLKSKEKIINNTSN

Snake diagram with key positions labelled



Modeled Structuresback to top


Model start:   19     Model end:   96

Inward Open:

Template:   4X5M.pdb

Model structure:  A9BBY7_inward.pdb    Alignment file: A9BBY7_inw.pir

Procheck score ⇒ Ramachandran plot: 92.6% favored    5.9% allowed    1.5% week    .0% disallowed

Outward Open:

Template:   4X5N.pdb

Model structure:  A9BBY7_outward.pdb    Alignment file: A9BBY7_out.pir

Procheck score ⇒ Ramachandran plot: 91.9% favored    7.4% allowed    .7% week    .0% disallowed

Occluded:

Template:   4QNC.pdb      4RNG.pdb

Model structure:  A9BBY7_occluded.pdb    Alignment file: A9BBY7_occ.pir

Procheck score ⇒ Ramachandran plot: 97.1% favored    2.9% allowed    .0% week    .0% disallowed

Gene Informationback to top


Not Available

Gene Ontologyback to top


GO:0016021 - integral component of membrane

Family Classificationback to top


Pfam:   PF03083: MtN3_slv 

Interpro:   IPR004316: SWEET_sugar_transpr. 

Panther:   NA

Bioinformatics and Biomolecular Simulation Laboratory, Department of Biological Sciences and Bioengineering, IIT Kanpur