| Basic Information |
| Taxanomy |
| Sequence Information |
| Modeled Structures |
| Gene Information |
| Gene Ontology |
| Family Classification |
Details : A8XRN1
dbSWEET id: dbswt_1115
Accession: A8XRN1
Uniprot status: Unreviewed
Organism: Caenorhabditis briggsae
Kingdom: Metazoa
Taxonomy back to top
Eukaryota ⇒ Metazoa ⇒ Ecdysozoa ⇒ Nematoda ⇒ Chromadorea ⇒ Rhabditida ⇒ Rhabditoidea ⇒ Rhabditidae ⇒ Peloderinae ⇒ Caenorhabditis.
Sequence Information back to top
Sequence length: 359
Substrate Binding Site: GTWN CVV: 400 CHI: -5.5
Selectivity Filter: LGDV CVV: 368 CHI: 4.1
Fasta sequence:
>tr|A8XRN1|A8XRN1_CAEBR|Unreviewed|Caenorhabditis_briggsae|359
MFEIFTQGFSFLNLLSILAFFTTVGLFFCGIPICRQIWKRKDTKEISGAPFLMGVVGGCC
WMTYGWLKNDGTVKWVTGCQVILYTTYTIFYWCMTKKKLWITLKVLGVIGICTSLVLGVH
FFGMKIFHPLGIVCLTLNIADFAAPLGGIRVVIRRWATSTLPLPLCIANFLVSSEWFLYG
LLKNDFYLIFPNGVGSLLAFIQLLLFVVLPRKPGQRAPIVRLWLWIRGVKVEETKEIVAE
LGECDEKKMNRAQRWSQKIKMNVSTVAEELENVIYNLPTKDQFAYTHKIGDDDSSSEKTV
ETPEGSKKTSVVEAPKVSPVIEGVKDADFERKMRNSLRAAQEARETALRRTISSPDLSD
Snake diagram with key positions labelled
Modeled Structuresback to top
Model start: 5 Model end: 211
Alignment file: A8XRN1.pir
Inward Open:
Template: 5CTG.pdb
Model structure: A8XRN1_inward.pdb
Procheck score ⇒ Ramachandran plot: 89.3% favored 8.5% allowed .6% week 1.7% disallowed
Outward Open:
Template: 5CTG_outward.pdb
Model structure: A8XRN1_outward.pdb
Procheck score ⇒ Ramachandran plot: 92.7% favored 7.3% allowed .0% week .0% disallowed
Occluded:
Template: 5CTG_occluded.pdb
Model structure: A8XRN1_occluded.pdb
Procheck score ⇒ Ramachandran plot: 88.7% favored 9.0% allowed 1.1% week 1.1% disallowed
Gene Ontologyback to top
GO:0016021 - integral component of membrane
GO:0051119 - sugar transmembrane transporter activity
GO:0008643 - carbohydrate transport
Family Classificationback to top
Pfam: PF03083: MtN3_slv
Interpro: IPR004316: SWEET_sugar_transpr.
Panther: NA